BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011C10LP1|AL426188
(765 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig992 765 0.0
3x_Contig1054 741 0.0
>3x_Contig992
Length = 4146
Score = 765 bits (386), Expect = 0.0
Identities = 399/402 (99%), Gaps = 1/402 (0%)
Strand = Plus / Plus
Query: 364 cctttcctttgttctttgtttcacattttcgtttccgggaaaactgttactccttgttaa 423
|||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 cctttccttttttcttt-tttcacattttcgtttccgggaaaactgttactccttgttaa 101
Query: 424 ccattttttaatccttattccttttatatttgtcgtatcaaattcccttttttcacaact 483
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 102 ccattttttaatccttattccttttatatttgtcgtatgaaattcccttttttcacaact 161
Query: 484 cattgacctaaataaggaagggaagataaagggagcctgagaagagaagactgcgaagag 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 cattgacctaaataaggaagggaagataaagggagcctgagaagagaagactgcgaagag 221
Query: 544 acaagtggcagatgcggtgcaggtgcagtgcatgtgcaggagttagtgatctgcatcaat 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 acaagtggcagatgcggtgcaggtgcagtgcatgtgcaggagttagtgatctgcatcaat 281
Query: 604 aggtaatatgttcttgaacgctttctttttttatagtattaaaagaataatatcgactat 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 aggtaatatgttcttgaacgctttctttttttatagtattaaaagaataatatcgactat 341
Query: 664 ttaactattatttctttacacttctgatgcagttctgctattctttcagctgtatccatg 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ttaactattatttctttacacttctgatgcagttctgctattctttcagctgtatccatg 401
Query: 724 aatagtttgaactcttcgattagaacgctgacgataatgtta 765
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 aatagtttgaactcttcgattagaacgctgacgataatgtta 443
>3x_Contig1054
Length = 4453
Score = 741 bits (374), Expect = 0.0
Identities = 374/374 (100%)
Strand = Plus / Minus
Query: 1 atcctctaagtcgctgcttgtcaccgataaaatatcgtccatttcaccagcgtcaagatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 atcctctaagtcgctgcttgtcaccgataaaatatcgtccatttcaccagcgtcaagatc 323
Query: 61 cctgatggaatatgtaccgtccacaccaccaacgaccccccaagtgtcatttccatccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cctgatggaatatgtaccgtccacaccaccaacgaccccccaagtgtcatttccatccac 263
Query: 121 tgatgtacatctatcttttacttcagccatcgcttcgctttaatcaaaaaaaaaatctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgatgtacatctatcttttacttcagccatcgcttcgctttaatcaaaaaaaaaatctcc 203
Query: 181 tagctccttgattttacgcctgaagcttgatctacaataagtttatactgacagaattaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tagctccttgattttacgcctgaagcttgatctacaataagtttatactgacagaattaa 143
Query: 241 tactaaaatgtcacacttaatatgtctctgatattccaataatgatagttagttgccagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 tactaaaatgtcacacttaatatgtctctgatattccaataatgatagttagttgccagc 83
Query: 301 aacgttctaaaattcttatcagtcctatatatatttcttgagtataatcacaaaaccagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 aacgttctaaaattcttatcagtcctatatatatttcttgagtataatcacaaaaccagg 23
Query: 361 acgcctttcctttg 374
||||||||||||||
Sbjct: 22 acgcctttcctttg 9
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7291
Number of Sequences: 1807
Number of extensions: 7291
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 2
length of query: 765
length of database: 10,358,551
effective HSP length: 16
effective length of query: 749
effective length of database: 10,329,639
effective search space: 7736899611
effective search space used: 7736899611
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)